T1IN09_STRMM protein (Strigamia maritima) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

T1IN09_STRMM

Receptor protein-tyrosine kinase. (926 aa)

Predicted Functional Partners:

T1IWL0_STRMM

0.988

T1IWZ8_STRMM

0.987

T1IM99_STRMM

0.972

T1J823_STRMM

0.972

T1JFD2_STRMM

0.972

T1J4B3_STRMM

0.970

T1J9K9_STRMM

0.970

T1JM94_STRMM

0.967

T1IHK2_STRMM

0.957

T1IYC0_STRMM

0.955

Your Current Organism:

Strigamia maritima

NCBI taxonomy Id: 126957
Other names: S. maritima

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T1IHK2_STRMM	T1IN09_STRMM	T1IHK2	T1IN09	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma; Mediates the production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3). Plays an important role in the regulation of intracellular signaling cascades.	Receptor protein-tyrosine kinase.	0.957
T1IHK2_STRMM	T1IWL0_STRMM	T1IHK2	T1IWL0	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma; Mediates the production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3). Plays an important role in the regulation of intracellular signaling cascades.	Uncharacterized protein.	0.879
T1IHK2_STRMM	T1IWZ8_STRMM	T1IHK2	T1IWZ8	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma; Mediates the production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3). Plays an important role in the regulation of intracellular signaling cascades.	Uncharacterized protein.	0.982
T1IHK2_STRMM	T1IYC0_STRMM	T1IHK2	T1IYC0	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma; Mediates the production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3). Plays an important role in the regulation of intracellular signaling cascades.	Uncharacterized protein.	0.572
T1IHK2_STRMM	T1J4B3_STRMM	T1IHK2	T1J4B3	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma; Mediates the production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3). Plays an important role in the regulation of intracellular signaling cascades.	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.	0.758
T1IHK2_STRMM	T1J823_STRMM	T1IHK2	T1J823	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma; Mediates the production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3). Plays an important role in the regulation of intracellular signaling cascades.	Uncharacterized protein.	0.861
T1IHK2_STRMM	T1J9K9_STRMM	T1IHK2	T1J9K9	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma; Mediates the production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3). Plays an important role in the regulation of intracellular signaling cascades.	Uncharacterized protein.	0.879
T1IHK2_STRMM	T1JM94_STRMM	T1IHK2	T1JM94	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma; Mediates the production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3). Plays an important role in the regulation of intracellular signaling cascades.	Protein kinase domain-containing protein.	0.897
T1IM99_STRMM	T1IN09_STRMM	T1IM99	T1IN09	Uncharacterized protein.	Receptor protein-tyrosine kinase.	0.972
T1IM99_STRMM	T1IWZ8_STRMM	T1IM99	T1IWZ8	Uncharacterized protein.	Uncharacterized protein.	0.678
T1IM99_STRMM	T1J823_STRMM	T1IM99	T1J823	Uncharacterized protein.	Uncharacterized protein.	0.679
T1IM99_STRMM	T1J9K9_STRMM	T1IM99	T1J9K9	Uncharacterized protein.	Uncharacterized protein.	0.717
T1IM99_STRMM	T1JFD2_STRMM	T1IM99	T1JFD2	Uncharacterized protein.	Uncharacterized protein.	0.537
T1IM99_STRMM	T1JM94_STRMM	T1IM99	T1JM94	Uncharacterized protein.	Protein kinase domain-containing protein.	0.631
T1IN09_STRMM	T1IHK2_STRMM	T1IN09	T1IHK2	Receptor protein-tyrosine kinase.	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma; Mediates the production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3). Plays an important role in the regulation of intracellular signaling cascades.	0.957
T1IN09_STRMM	T1IM99_STRMM	T1IN09	T1IM99	Receptor protein-tyrosine kinase.	Uncharacterized protein.	0.972
T1IN09_STRMM	T1IWL0_STRMM	T1IN09	T1IWL0	Receptor protein-tyrosine kinase.	Uncharacterized protein.	0.988
T1IN09_STRMM	T1IWZ8_STRMM	T1IN09	T1IWZ8	Receptor protein-tyrosine kinase.	Uncharacterized protein.	0.987
T1IN09_STRMM	T1IYC0_STRMM	T1IN09	T1IYC0	Receptor protein-tyrosine kinase.	Uncharacterized protein.	0.955
T1IN09_STRMM	T1J4B3_STRMM	T1IN09	T1J4B3	Receptor protein-tyrosine kinase.	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.	0.970