STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T1INB5_STRMMDefective in cullin neddylation protein; Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity. (284 aa)    
Predicted Functional Partners:
T1ISS0_STRMM
CULLIN_2 domain-containing protein; Belongs to the cullin family.
   
 0.985
T1J710_STRMM
UBX domain-containing protein.
     
 0.975
T1IW13_STRMM
Uncharacterized protein; Belongs to the cullin family.
   
 0.965
T1IQB4_STRMM
RING-type domain-containing protein.
    
 0.953
T1JKA9_STRMM
Zf-rbx1 domain-containing protein.
    
 0.953
T1JK90_STRMM
CULLIN_2 domain-containing protein; Belongs to the cullin family.
   
 0.936
T1ISH3_STRMM
Cullin domain-containing protein; Belongs to the cullin family.
   
 0.922
T1IP91_STRMM
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.918
T1J130_STRMM
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.918
T1JGH3_STRMM
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.918
Your Current Organism:
Strigamia maritima
NCBI taxonomy Id: 126957
Other names: S. maritima
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