STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T1IPH9_STRMMNop domain-containing protein. (1300 aa)    
Predicted Functional Partners:
T1IIB2_STRMM
WD_REPEATS_REGION domain-containing protein.
   
 0.999
T1IID0_STRMM
Uncharacterized protein.
   
 
 0.999
T1IJG7_STRMM
Uncharacterized protein.
   
 0.999
T1IMG5_STRMM
Uncharacterized protein.
   
 0.999
T1IN28_STRMM
WD_REPEATS_REGION domain-containing protein.
   
 0.999
T1IRE8_STRMM
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
 0.999
T1IXW1_STRMM
RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.
   
 
 0.999
T1J505_STRMM
WD_REPEATS_REGION domain-containing protein.
   
 0.999
T1J751_STRMM
WD_REPEATS_REGION domain-containing protein.
   
 
 0.999
T1JD22_STRMM
WD_REPEATS_REGION domain-containing protein.
   
 
 0.999
Your Current Organism:
Strigamia maritima
NCBI taxonomy Id: 126957
Other names: S. maritima
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.