STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T1IPJ2_STRMMWD_REPEATS_REGION domain-containing protein. (345 aa)    
Predicted Functional Partners:
T1JEM5_STRMM
Uncharacterized protein.
 
      0.897
T1JCX6_STRMM
Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat WDR12/YTM1 family.
   
 
 0.877
T1J972_STRMM
TPR_REGION domain-containing protein.
   
    0.667
T1J7X8_STRMM
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.
   
 
 0.608
T1J4W3_STRMM
Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family.
   
   0.607
T1JG15_STRMM
Uncharacterized protein.
   
   0.607
T1IN01_STRMM
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
    0.576
T1IYP7_STRMM
BP28CT domain-containing protein.
   
   0.573
T1J0A3_STRMM
BP28CT domain-containing protein.
   
   0.573
T1JLE5_STRMM
Uncharacterized protein.
   
  
 0.573
Your Current Organism:
Strigamia maritima
NCBI taxonomy Id: 126957
Other names: S. maritima
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.