STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T1IQT6_STRMMUncharacterized protein. (186 aa)    
Predicted Functional Partners:
T1IPK6_STRMM
Uncharacterized protein.
     
 0.834
T1J6X7_STRMM
Uncharacterized protein.
    
 0.832
T1IVL3_STRMM
PLA2c domain-containing protein.
    
 0.829
T1INN5_STRMM
Cytochrome b5 heme-binding domain-containing protein.
     
 0.806
T1JK58_STRMM
Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.
   
 0.775
T1IUS3_STRMM
Uncharacterized protein.
  
 0.714
T1J1S9_STRMM
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 0.691
T1J8I3_STRMM
Med1 domain-containing protein.
    
  0.686
MED17
Mediator of RNA polymerase II transcription subunit 17; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.
    
 0.685
T1JHF0_STRMM
Uncharacterized protein.
    
 0.685
Your Current Organism:
Strigamia maritima
NCBI taxonomy Id: 126957
Other names: S. maritima
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