STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T1IQW3_STRMMCAP-ZIP_m domain-containing protein. (844 aa)    
Predicted Functional Partners:
T1J4E9_STRMM
WH2 domain-containing protein.
    
 
 0.869
T1IW38_STRMM
Uncharacterized protein.
   
 
 0.820
T1JIZ8_STRMM
Uncharacterized protein.
    
 
 0.766
T1J3X6_STRMM
Uncharacterized protein.
   
 
 0.761
T1IQD8_STRMM
Uncharacterized protein.
    
 
 0.712
T1ISA6_STRMM
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
    
 
 0.699
T1J6J4_STRMM
Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.
    
 
 0.699
T1J0A2_STRMM
Uncharacterized protein.
   
 
 0.603
T1IJX8_STRMM
SMC_N domain-containing protein.
   
 
 0.595
T1ISE5_STRMM
F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.
    
 
 0.533
Your Current Organism:
Strigamia maritima
NCBI taxonomy Id: 126957
Other names: S. maritima
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