STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T1IS86_STRMMFibrillar collagen NC1 domain-containing protein. (773 aa)    
Predicted Functional Partners:
T1J3Q8_STRMM
Uncharacterized protein.
    
 0.796
T1JIE1_STRMM
TROVE domain-containing protein.
    
 0.796
T1IVJ9_STRMM
Uncharacterized protein.
    
 0.793
T1IVL3_STRMM
PLA2c domain-containing protein.
     
 0.785
T1IYR1_STRMM
Uncharacterized protein.
    
 0.677
T1JK41_STRMM
Uncharacterized protein.
    
 0.677
T1JG75_STRMM
Metalloendopeptidase.
    
 0.671
T1IVE2_STRMM
Fe2OG dioxygenase domain-containing protein.
   
 0.653
T1IIA4_STRMM
Ig-like domain-containing protein.
    
 0.650
T1JH08_STRMM
Uncharacterized protein.
    
 0.650
Your Current Organism:
Strigamia maritima
NCBI taxonomy Id: 126957
Other names: S. maritima
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