STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T1IVS6_STRMMFerrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. (401 aa)    
Predicted Functional Partners:
T1IT59_STRMM
Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.
  
 
 0.989
T1JFT7_STRMM
Uncharacterized protein.
    
 0.973
T1JKF0_STRMM
Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.
 
  
 0.954
T1J9R8_STRMM
Uncharacterized protein.
  
  
 0.923
T1IZ75_STRMM
Uncharacterized protein.
  
 
 0.915
T1IXM4_STRMM
Uncharacterized protein.
   
 
 0.909
T1IPE7_STRMM
Amino_oxidase domain-containing protein.
    
 0.897
T1IY15_STRMM
Uncharacterized protein.
    
 0.882
T1IY16_STRMM
4-hydroxybenzoate polyprenyltransferase, mitochondrial; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of coenzyme Q (CoQ) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate.
    
 0.882
T1J4Z6_STRMM
Uncharacterized protein.
    
 0.876
Your Current Organism:
Strigamia maritima
NCBI taxonomy Id: 126957
Other names: S. maritima
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