STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T1IX41_STRMMADH_N domain-containing protein. (299 aa)    
Predicted Functional Partners:
T1JMW0_STRMM
Fe-ADH domain-containing protein.
  
 0.991
T1JKA8_STRMM
S-(hydroxymethyl)glutathione dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
   
 0.974
T1IPR1_STRMM
MADS-box domain-containing protein.
    
 0.958
T1JMV3_STRMM
Aldedh domain-containing protein.
  
 
 0.903
T1J0E2_STRMM
Uncharacterized protein.
  
 
 0.901
T1JL64_STRMM
SCP2 domain-containing protein.
  
 0.901
T1IX42_STRMM
PKS_ER domain-containing protein.
  
 0.882
T1JHB8_STRMM
Uncharacterized protein.
  
 0.882
T1J614_STRMM
Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
  
 
 0.854
T1ITF3_STRMM
Uncharacterized protein.
  
 
 0.853
Your Current Organism:
Strigamia maritima
NCBI taxonomy Id: 126957
Other names: S. maritima
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