T1IXP7_STRMM protein (Strigamia maritima) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

T1IXP7_STRMM

CULLIN_2 domain-containing protein; Belongs to the cullin family. (779 aa)

Predicted Functional Partners:

T1IJR4_STRMM

0.999

T1IR26_STRMM

0.999

T1J2T0_STRMM

0.999

T1J8K9_STRMM

0.999

T1JC23_STRMM

0.999

T1JEI7_STRMM

0.999

T1JH63_STRMM

0.999

T1JHN4_STRMM

0.999

T1JJR3_STRMM

0.999

T1IXY3_STRMM

0.998

Your Current Organism:

Strigamia maritima

NCBI taxonomy Id: 126957
Other names: S. maritima

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T1IJR4_STRMM	T1IR26_STRMM	T1IJR4	T1IR26	Anaphase-promoting complex subunit 4; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin ligase that controls progression through mitosis and the G1 phase of the cell cycle. Belongs to the APC4 family.	ANAPC5 domain-containing protein.	0.999
T1IJR4_STRMM	T1IXP7_STRMM	T1IJR4	T1IXP7	Anaphase-promoting complex subunit 4; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin ligase that controls progression through mitosis and the G1 phase of the cell cycle. Belongs to the APC4 family.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.999
T1IJR4_STRMM	T1IXY3_STRMM	T1IJR4	T1IXY3	Anaphase-promoting complex subunit 4; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin ligase that controls progression through mitosis and the G1 phase of the cell cycle. Belongs to the APC4 family.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.996
T1IJR4_STRMM	T1J2T0_STRMM	T1IJR4	T1J2T0	Anaphase-promoting complex subunit 4; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin ligase that controls progression through mitosis and the G1 phase of the cell cycle. Belongs to the APC4 family.	Uncharacterized protein.	0.999
T1IJR4_STRMM	T1J8K9_STRMM	T1IJR4	T1J8K9	Anaphase-promoting complex subunit 4; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin ligase that controls progression through mitosis and the G1 phase of the cell cycle. Belongs to the APC4 family.	APC1_C domain-containing protein.	0.999
T1IJR4_STRMM	T1JC23_STRMM	T1IJR4	T1JC23	Anaphase-promoting complex subunit 4; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin ligase that controls progression through mitosis and the G1 phase of the cell cycle. Belongs to the APC4 family.	Uncharacterized protein.	0.999
T1IJR4_STRMM	T1JEI7_STRMM	T1IJR4	T1JEI7	Anaphase-promoting complex subunit 4; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin ligase that controls progression through mitosis and the G1 phase of the cell cycle. Belongs to the APC4 family.	Uncharacterized protein.	0.999
T1IJR4_STRMM	T1JH63_STRMM	T1IJR4	T1JH63	Anaphase-promoting complex subunit 4; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin ligase that controls progression through mitosis and the G1 phase of the cell cycle. Belongs to the APC4 family.	TPR_REGION domain-containing protein.	0.999
T1IJR4_STRMM	T1JHN4_STRMM	T1IJR4	T1JHN4	Anaphase-promoting complex subunit 4; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin ligase that controls progression through mitosis and the G1 phase of the cell cycle. Belongs to the APC4 family.	Uncharacterized protein.	0.999
T1IJR4_STRMM	T1JJR3_STRMM	T1IJR4	T1JJR3	Anaphase-promoting complex subunit 4; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin ligase that controls progression through mitosis and the G1 phase of the cell cycle. Belongs to the APC4 family.	Anaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle.	0.999
T1IR26_STRMM	T1IJR4_STRMM	T1IR26	T1IJR4	ANAPC5 domain-containing protein.	Anaphase-promoting complex subunit 4; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin ligase that controls progression through mitosis and the G1 phase of the cell cycle. Belongs to the APC4 family.	0.999
T1IR26_STRMM	T1IXP7_STRMM	T1IR26	T1IXP7	ANAPC5 domain-containing protein.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.999
T1IR26_STRMM	T1IXY3_STRMM	T1IR26	T1IXY3	ANAPC5 domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.995
T1IR26_STRMM	T1J2T0_STRMM	T1IR26	T1J2T0	ANAPC5 domain-containing protein.	Uncharacterized protein.	0.999
T1IR26_STRMM	T1J8K9_STRMM	T1IR26	T1J8K9	ANAPC5 domain-containing protein.	APC1_C domain-containing protein.	0.999
T1IR26_STRMM	T1JC23_STRMM	T1IR26	T1JC23	ANAPC5 domain-containing protein.	Uncharacterized protein.	0.999
T1IR26_STRMM	T1JEI7_STRMM	T1IR26	T1JEI7	ANAPC5 domain-containing protein.	Uncharacterized protein.	0.999
T1IR26_STRMM	T1JH63_STRMM	T1IR26	T1JH63	ANAPC5 domain-containing protein.	TPR_REGION domain-containing protein.	0.999
T1IR26_STRMM	T1JHN4_STRMM	T1IR26	T1JHN4	ANAPC5 domain-containing protein.	Uncharacterized protein.	0.999
T1IR26_STRMM	T1JJR3_STRMM	T1IR26	T1JJR3	ANAPC5 domain-containing protein.	Anaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle.	0.999