STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T1IXY2_STRMMUncharacterized protein. (241 aa)    
Predicted Functional Partners:
T1JIV3_STRMM
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.999
T1IJR2_STRMM
S4 RNA-binding domain-containing protein.
  
 0.998
T1IY86_STRMM
Uncharacterized protein; Belongs to the universal ribosomal protein uS13 family.
  
 0.998
T1J131_STRMM
Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.
  
 0.998
T1J1Q4_STRMM
KH type-2 domain-containing protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
  
 0.998
T1JDX7_STRMM
Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.
  
 0.998
T1JF32_STRMM
Ribosomal_S10 domain-containing protein.
  
 0.998
T1JI14_STRMM
Uncharacterized protein.
  
 0.998
T1JIB6_STRMM
40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.
  
 0.998
T1JLN9_STRMM
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
  
 0.998
Your Current Organism:
Strigamia maritima
NCBI taxonomy Id: 126957
Other names: S. maritima
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