STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T1IZ90_STRMMA to I editase domain-containing protein. (392 aa)    
Predicted Functional Partners:
T1JNG3_STRMM
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.764
T1J1M0_STRMM
Thioredoxin; Belongs to the thioredoxin family.
    
   0.573
T1IHK0_STRMM
Lysine--tRNA ligase.
 
    
 0.535
T1JP38_STRMM
CMP/dCMP-type deaminase domain-containing protein.
      
 0.529
T1IQL5_STRMM
S1 motif domain-containing protein.
    
 
 0.494
T1IJQ0_STRMM
Serine/threonine-protein phosphatase 2A activator; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.
   
  
 0.447
T1IPR2_STRMM
Peptidase_M28 domain-containing protein.
   
  
 0.417
T1IWC8_STRMM
Uncharacterized protein.
      
 0.416
T1JB44_STRMM
CMP/dCMP-type deaminase domain-containing protein.
      
 0.416
Your Current Organism:
Strigamia maritima
NCBI taxonomy Id: 126957
Other names: S. maritima
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