STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T1IZY6_STRMMUDENN domain-containing protein. (930 aa)    
Predicted Functional Partners:
T1JL36_STRMM
Uncharacterized protein.
    
 0.937
T1JP21_STRMM
Uncharacterized protein.
    
 0.937
T1J1P7_STRMM
Uncharacterized protein.
     
 0.660
T1J4P5_STRMM
Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane.
   
 
  0.644
T1II32_STRMM
14_3_3 domain-containing protein; Belongs to the 14-3-3 family.
    
  0.640
T1ITR0_STRMM
14_3_3 domain-containing protein; Belongs to the 14-3-3 family.
    
  0.640
T1J355_STRMM
Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.
     
 0.632
T1IL44_STRMM
BTB domain-containing protein.
     
 0.597
T1IY47_STRMM
Uncharacterized protein.
    
 
 0.587
T1INN5_STRMM
Cytochrome b5 heme-binding domain-containing protein.
      
 0.562
Your Current Organism:
Strigamia maritima
NCBI taxonomy Id: 126957
Other names: S. maritima
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.