STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T1J4E9_STRMMWH2 domain-containing protein. (455 aa)    
Predicted Functional Partners:
T1IW38_STRMM
Uncharacterized protein.
   
 0.949
T1J3X6_STRMM
Uncharacterized protein.
    
 0.920
T1JHR1_STRMM
Uncharacterized protein.
     
 0.881
T1IQW3_STRMM
CAP-ZIP_m domain-containing protein.
    
 
 0.869
T1JNH9_STRMM
Uncharacterized protein.
    
 
 0.869
T1J4W2_STRMM
HSF_DOMAIN domain-containing protein.
   
 
 0.798
T1JJV2_STRMM
FH2 domain-containing protein.
    
 0.700
T1ISA6_STRMM
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
    
 
 0.683
T1IZF7_STRMM
WH2 domain-containing protein.
     
0.675
T1J6B7_STRMM
SH3 domain-containing protein.
     
 0.657
Your Current Organism:
Strigamia maritima
NCBI taxonomy Id: 126957
Other names: S. maritima
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