STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T1J4V2_STRMMNudix hydrolase domain-containing protein. (451 aa)    
Predicted Functional Partners:
T1J1U9_STRMM
RRM domain-containing protein.
 
   
  0.923
T1JA82_STRMM
Nudix hydrolase domain-containing protein.
    
 0.901
T1JJ70_STRMM
Pribosyltran_N domain-containing protein.
     
 0.820
T1IIR8_STRMM
ANK_REP_REGION domain-containing protein; Belongs to the transient receptor (TC 1.A.4) family.
     
 0.787
T1IMS0_STRMM
ANK_REP_REGION domain-containing protein; Belongs to the transient receptor (TC 1.A.4) family.
     
 0.787
T1JC65_STRMM
Pyruvate dehydrogenase E1 component subunit alpha; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
     
 0.774
T1JG01_STRMM
Deoxyribonuclease; Belongs to the DNase I family.
     
 0.766
T1JJG5_STRMM
Aa_trans domain-containing protein.
     
 0.766
T1JDL7_STRMM
RRM domain-containing protein.
   
 
  0.740
T1JH04_STRMM
Nudix hydrolase domain-containing protein.
    
 0.708
Your Current Organism:
Strigamia maritima
NCBI taxonomy Id: 126957
Other names: S. maritima
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