STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T1J5R0_STRMMKri1_C domain-containing protein. (615 aa)    
Predicted Functional Partners:
T1IN01_STRMM
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 
 0.996
T1J060_STRMM
Uncharacterized protein.
   
  0.987
T1ISN2_STRMM
Uncharacterized protein.
   
  0.986
T1J485_STRMM
Ribonuclease P protein subunit p29; Component of ribonuclease P, a ribonucleoprotein complex that generates mature tRNA molecules by cleaving their 5'-ends.
   
  0.986
T1IXM5_STRMM
Uncharacterized protein.
   
  0.969
T1J9K3_STRMM
Thioredoxin domain-containing protein.
   
  
 0.925
T1J247_STRMM
Uncharacterized protein; Belongs to the DEAD box helicase family.
   
 
 0.914
T1INJ3_STRMM
WSC domain-containing protein.
    
  0.911
T1IQ75_STRMM
Uncharacterized protein.
    
  0.911
T1IJG7_STRMM
Uncharacterized protein.
   
 
 0.902
Your Current Organism:
Strigamia maritima
NCBI taxonomy Id: 126957
Other names: S. maritima
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