STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T1J7S4_STRMMUncharacterized protein. (126 aa)    
Predicted Functional Partners:
T1J4Z6_STRMM
Uncharacterized protein.
    
 0.999
T1JKW4_STRMM
Uncharacterized protein.
   
 0.998
T1IPG6_STRMM
UPF0020 domain-containing protein.
   
 0.992
T1JHK5_STRMM
SAM_MT_TRM5_TYW2 domain-containing protein.
   
 
 0.987
T1JM27_STRMM
Methyltransf_25 domain-containing protein.
   
 0.985
T1JBN7_STRMM
Methyltransf_11 domain-containing protein.
   
 0.984
T1JIV3_STRMM
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.979
T1IRL9_STRMM
MTS domain-containing protein.
    
 
 0.970
T1IS59_STRMM
rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.
   
 
 0.896
T1JKQ1_STRMM
tRNA (guanine(37)-N1)-methyltransferase; Specifically methylates the N1 position of guanosine-37 in various cytoplasmic and mitochondrial tRNAs. Methylation is not dependent on the nature of the nucleoside 5' of the target nucleoside. This is the first step in the biosynthesis of wybutosine (yW), a modified base adjacent to the anticodon of tRNAs and required for accurate decoding; Belongs to the TRM5 / TYW2 family.
   
 
 0.890
Your Current Organism:
Strigamia maritima
NCBI taxonomy Id: 126957
Other names: S. maritima
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