STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T1J7T2_STRMMRRM domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (1163 aa)    
Predicted Functional Partners:
T1JND6_STRMM
Uncharacterized protein.
 
 
 0.977
T1JAR2_STRMM
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.902
T1IVI4_STRMM
Brix domain-containing protein.
 
 
  
 0.896
T1JM65_STRMM
Tyrosine--tRNA ligase.
  
 
 0.891
T1IPR4_STRMM
Uncharacterized protein.
  
 
 0.888
T1JCF2_STRMM
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.852
T1J3R6_STRMM
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
0.844
T1IPW0_STRMM
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
0.827
T1IZ92_STRMM
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
0.820
T1J196_STRMM
AA_TRNA_LIGASE_II domain-containing protein.
  
  
 0.815
Your Current Organism:
Strigamia maritima
NCBI taxonomy Id: 126957
Other names: S. maritima
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