STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T1JBB1_STRMMUncharacterized protein. (499 aa)    
Predicted Functional Partners:
T1IVI0_STRMM
Uncharacterized protein.
   
 0.993
T1JHV8_STRMM
Myosin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.926
T1IRR9_STRMM
Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
    
 0.870
T1IVJ9_STRMM
Uncharacterized protein.
    
 0.859
T1JJ32_STRMM
Sidoreflexin.
 
  
 0.859
T1JE93_STRMM
Uncharacterized protein.
    
 0.820
T1JKQ8_STRMM
PDZ domain-containing protein.
    
 0.820
T1IVL3_STRMM
PLA2c domain-containing protein.
    
 0.780
T1J7X8_STRMM
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.
    
  0.760
T1JGD8_STRMM
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
    
 0.744
Your Current Organism:
Strigamia maritima
NCBI taxonomy Id: 126957
Other names: S. maritima
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