STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T1JBU6_STRMMANK_REP_REGION domain-containing protein; Belongs to the transient receptor (TC 1.A.4) family. (904 aa)    
Predicted Functional Partners:
T1JE93_STRMM
Uncharacterized protein.
    
 0.797
T1JKQ8_STRMM
PDZ domain-containing protein.
    
 0.797
T1JJC4_STRMM
JmjC domain-containing protein.
    
   0.776
KATNAL2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
    
 0.729
T1IZS5_STRMM
IFT81_CH domain-containing protein.
    
 0.703
T1IVL3_STRMM
PLA2c domain-containing protein.
    
 0.694
T1JLE5_STRMM
Uncharacterized protein.
    
 0.693
T1J1M4_STRMM
PKD_channel domain-containing protein.
     
 0.669
T1J710_STRMM
UBX domain-containing protein.
    
 0.668
T1JK26_STRMM
Uncharacterized protein.
    
 0.653
Your Current Organism:
Strigamia maritima
NCBI taxonomy Id: 126957
Other names: S. maritima
Server load: low (30%) [HD]