STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T1JFM6_STRMMUncharacterized protein. (235 aa)    
Predicted Functional Partners:
T1JP07_STRMM
Uncharacterized protein.
    
 0.988
T1JNY3_STRMM
Uncharacterized protein.
    
 0.919
T1JIX7_STRMM
GPI-anchor transamidase; Mediates GPI anchoring in the endoplasmic reticulum, by replacing a protein's C-terminal GPI attachment signal peptide with a pre-assembled GPI. During this transamidation reaction, the GPI transamidase forms a carbonyl intermediate with the substrate protein. Belongs to the peptidase C13 family.
   
 
 0.908
T1JBD9_STRMM
Mannosyltransferase.
     
 0.903
T1J0L8_STRMM
Uncharacterized protein.
     
 0.888
T1J040_STRMM
Uncharacterized protein.
     
 0.845
T1J4Z4_STRMM
Uncharacterized protein.
     
 0.835
T1JMX3_STRMM
PigN domain-containing protein.
    
 0.831
T1J4W4_STRMM
Uncharacterized protein.
     
 0.819
T1J9G1_STRMM
Aminotran_1_2 domain-containing protein.
     
 0.819
Your Current Organism:
Strigamia maritima
NCBI taxonomy Id: 126957
Other names: S. maritima
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