STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T1JG45_STRMMUncharacterized protein. (1543 aa)    
Predicted Functional Partners:
T1JLE5_STRMM
Uncharacterized protein.
    
 0.998
T1JB09_STRMM
V-SNARE domain-containing protein.
    
 
 0.971
T1IUB2_STRMM
ENTH domain-containing protein.
    
 0.866
T1IH15_STRMM
Uncharacterized protein.
    
 0.855
T1IYZ2_STRMM
Adaptin_N domain-containing protein.
    
 0.843
T1JMF6_STRMM
AP-1 complex subunit gamma.
    
 0.842
T1J2J6_STRMM
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
    
 0.823
T1JFU0_STRMM
Tyrosine-protein kinase receptor.
    
  0.815
T1JKJ1_STRMM
Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.
    
 0.812
T1J486_STRMM
Guanylate cyclase.
    
  0.785
Your Current Organism:
Strigamia maritima
NCBI taxonomy Id: 126957
Other names: S. maritima
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