STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T1JK63_STRMMTHUMP domain-containing protein. (273 aa)    
Predicted Functional Partners:
T1IXW1_STRMM
RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.
   
 0.892
T1J0H2_STRMM
C3H1-type domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Trm1 family.
    
 
 0.720
T1IW45_STRMM
TruB_N domain-containing protein.
   
 
 0.715
T1JM82_STRMM
Uncharacterized protein.
   
 
 0.695
T1J4T7_STRMM
Dyskerin.
   
 
 0.588
T1J0Z9_STRMM
Uncharacterized protein.
   
 
 0.582
T1J254_STRMM
Repressor of RNA polymerase III transcription MAF1; Element of the TORC1 signaling pathway that acts as a mediator of diverse signals and that represses RNA polymerase III transcription. Inhibits the de novo assembly of TFIIIB onto DNA. Belongs to the MAF1 family.
    
 
 0.540
T1IV34_STRMM
Uncharacterized protein.
   
   0.515
T1J741_STRMM
PseudoU_synth_1 domain-containing protein.
   
 
 0.490
T1J1T2_STRMM
Uncharacterized protein.
   
 
 0.472
Your Current Organism:
Strigamia maritima
NCBI taxonomy Id: 126957
Other names: S. maritima
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