STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T1JKM7_STRMMFHA domain-containing protein. (294 aa)    
Predicted Functional Partners:
T1INA9_STRMM
RRM domain-containing protein.
   
 0.999
T1ITH9_STRMM
Uncharacterized protein.
   
 0.997
T1JH32_STRMM
Uncharacterized protein.
   
 
 0.994
T1JEJ7_STRMM
MI domain-containing protein.
   
 
 0.971
T1J7Z9_STRMM
Uncharacterized protein.
    
 
 0.968
T1J1A2_STRMM
Uncharacterized protein.
    
 0.966
T1J1H1_STRMM
Matrin-type domain-containing protein.
   
 
 0.964
T1JEY8_STRMM
PPIase cyclophilin-type domain-containing protein.
    
 0.964
T1JH05_STRMM
SKIP_SNW domain-containing protein.
    
 
 0.964
T1J790_STRMM
U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.
    
  0.962
Your Current Organism:
Strigamia maritima
NCBI taxonomy Id: 126957
Other names: S. maritima
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.