STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T1JMF0_STRMMUBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (154 aa)    
Predicted Functional Partners:
T1JC78_STRMM
Uncharacterized protein.
    
 0.979
T1IX06_STRMM
Uncharacterized protein.
   
 0.950
T1IX07_STRMM
Uncharacterized protein.
   
 0.950
T1JDY1_STRMM
E3 ubiquitin-protein ligase.
    
 0.949
T1IVF8_STRMM
Uncharacterized protein.
    
 0.937
T1IJL7_STRMM
UBA_e1_C domain-containing protein; Belongs to the ubiquitin-activating E1 family.
  
 0.922
T1JK56_STRMM
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 0.922
T1JMG8_STRMM
Uncharacterized protein.
   
 0.922
T1J5I4_STRMM
Uncharacterized protein.
   
 0.916
T1J641_STRMM
RBR-type E3 ubiquitin transferase.
   
 0.916
Your Current Organism:
Strigamia maritima
NCBI taxonomy Id: 126957
Other names: S. maritima
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.