STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000708265_01844Unannotated protein. (372 aa)    
Predicted Functional Partners:
GCA_000708265_01843
Unannotated protein.
  0.974
GCA_000708265_01842
Unannotated protein.
 
  0.970
GCA_000708265_01364
Unannotated protein.
 
 0.958
GCA_000708265_01530
Unannotated protein.
  0.931
GCA_000708265_02086
Unannotated protein.
  0.931
GCA_000708265_03384
Unannotated protein.
  0.931
GCA_000708265_01531
Unannotated protein.
 
  0.924
GCA_000708265_02085
Unannotated protein.
 
  0.923
GCA_000708265_03385
Unannotated protein.
 
  0.922
GCA_000708265_03192
Unannotated protein.
 
  0.906
Your Current Organism:
Pedobacter sp. R2019
NCBI taxonomy Id: 1270196
Other names: P. sp. R20-19, Pedobacter sp. R20-19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.