STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000708265_01974Unannotated protein. (332 aa)    
Predicted Functional Partners:
GCA_000708265_01973
Unannotated protein.
 
     0.920
GCA_000708265_01975
Unannotated protein.
 
     0.821
GCA_000708265_02897
Unannotated protein.
 
     0.773
GCA_000708265_04092
Unannotated protein.
  
     0.769
GCA_000708265_02895
Unannotated protein.
  
     0.762
GCA_000708265_03415
Unannotated protein.
 
     0.761
GCA_000708265_02881
Unannotated protein.
  
     0.701
GCA_000708265_02535
Unannotated protein.
  
     0.698
GCA_000708265_03208
Unannotated protein.
  
     0.694
GCA_000708265_00663
Unannotated protein.
  
     0.691
Your Current Organism:
Pedobacter sp. R2019
NCBI taxonomy Id: 1270196
Other names: P. sp. R20-19, Pedobacter sp. R20-19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.