STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD16973.1Nucleotide-binding universal stress protein, UspA family. (144 aa)    
Predicted Functional Partners:
SDD16996.1
Uncharacterized protein YjbI, contains pentapeptide repeats.
       0.760
SDC24265.1
Hypothetical protein.
  
     0.695
SDC42524.1
FAD-NAD(P)-binding.
  
     0.646
SDC50918.1
Hypothetical protein.
  
     0.558
SDD88205.1
Hypothetical protein.
  
     0.530
SDD48022.1
Hypothetical protein.
  
    0.528
dnaE2
Error-prone DNA polymerase, DnaE-like; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase.
  
    0.520
SDD30759.1
Hypothetical protein.
  
     0.507
SDD20538.1
Adenosylcobinamide amidohydrolase.
  
     0.484
SDE00210.1
Poly-gamma-glutamate biosynthesis protein PgsC/CapC.
  
     0.484
Your Current Organism:
Alloactinosynnema iranicum
NCBI taxonomy Id: 1271860
Other names: A. iranicum, Alloactinosynnema iranicum Nikou et al. 2014, Alloactinosynnema sp. Chem10, CECT 8209, IBRC-M 10403, strain Chem10
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