STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KVA01_12010Unannotated protein. (257 aa)    
Predicted Functional Partners:
GCA_900014985_00708
Unannotated protein.
     0.994
KVA01_12100
Unannotated protein.
 
 
  0.897
KVA01_11990
Unannotated protein.
 
  
 0.893
KVA01_12050
Unannotated protein.
 
 
  0.877
KVA01_12070
Unannotated protein; Belongs to the TPP enzyme family.
 
  
 0.843
KVA01_12090
Unannotated protein.
 
 0.800
KVA01_12030
Unannotated protein.
 
 
  0.751
iolG
Unannotated protein.
  
  
 
0.710
KVA01_16170
Unannotated protein.
  
 
 0.627
KVA01_17000
Unannotated protein; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
  
 
 0.627
Your Current Organism:
Kocuria varians
NCBI taxonomy Id: 1272
Other names: ATCC 15306, CCM 884, CCUG 35392, CIP 81.73, DSM 20033, HAMBI 40, IEGM 400, IFO 15358, JCM 7238, K. varians, LMG 14231, LMG:14231, Micrococcus varians, NBRC 15358, NCDO 777, NCTC 7564
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.