STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KVA01_01910Unannotated protein. (479 aa)    
Predicted Functional Partners:
KVA01_02370
Unannotated protein.
  
    0.747
ureA
Unannotated protein; Belongs to the urease gamma subunit family.
      0.632
KVA01_01920
Unannotated protein.
       0.589
KVA01_02360
Unannotated protein.
 
    0.587
KVA01_02350
Unannotated protein.
    0.584
KVA01_08150
Unannotated protein; Involved in the recovery of exogenous heme iron. Extracts iron from heme while preserving the tetrapyrrol ring intact. Belongs to the DyP-type peroxidase family.
    0.539
KVA01_14390
Unannotated protein.
 
    0.524
KVA01_01930
Unannotated protein.
       0.470
nirA
Unannotated protein; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
     
 0.458
KVA01_02320
Unannotated protein.
     
 0.429
Your Current Organism:
Kocuria varians
NCBI taxonomy Id: 1272
Other names: ATCC 15306, CCM 884, CCUG 35392, CIP 81.73, DSM 20033, HAMBI 40, IEGM 400, IFO 15358, JCM 7238, K. varians, LMG 14231, LMG:14231, Micrococcus varians, NBRC 15358, NCDO 777, NCTC 7564
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.