STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KVA01_09050Unannotated protein. (525 aa)    
Predicted Functional Partners:
KVA01_09060
Unannotated protein; Catalyzes the oxidation of uric acid to 5-hydroxyisourate, which is further processed to form (S)-allantoin.
 
  
 0.727
KVA01_09080
Unannotated protein.
    0.665
KVA01_09070
Unannotated protein; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.
 
 
  0.656
pyrR
Unannotated protein; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant.
  
  
 0.651
pyrB
Unannotated protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
  
  
 0.651
pyrF
Unannotated protein; Belongs to the OMP decarboxylase family. Type 2 subfamily.
  
  
 0.624
carA
Unannotated protein; Belongs to the CarA family.
  
    0.617
pyrE
Unannotated protein; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).
  
  
 0.614
carB
Unannotated protein; Belongs to the CarB family.
  
    0.607
KVA01_08900
Unannotated protein.
  
  
 0.557
Your Current Organism:
Kocuria varians
NCBI taxonomy Id: 1272
Other names: ATCC 15306, CCM 884, CCUG 35392, CIP 81.73, DSM 20033, HAMBI 40, IEGM 400, IFO 15358, JCM 7238, K. varians, LMG 14231, LMG:14231, Micrococcus varians, NBRC 15358, NCDO 777, NCTC 7564
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.