STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KVA01_16270Unannotated protein. (361 aa)    
Predicted Functional Partners:
KVA01_07830
Unannotated protein.
    
 
 0.965
rbsC
Unannotated protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.958
rbsA
Unannotated protein.
 
 
 0.952
rbsB
Unannotated protein.
 
 
 0.952
rbsK
Unannotated protein; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
 
 0.933
rbsD
Unannotated protein; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.
 
 
 0.912
KVA01_05720
Unannotated protein.
 
 
 
 0.904
KVA01_14340
Unannotated protein.
    
 
 0.842
KVA01_05740
Unannotated protein.
     
 0.793
KVA01_12660
Unannotated protein.
  
     0.775
Your Current Organism:
Kocuria varians
NCBI taxonomy Id: 1272
Other names: ATCC 15306, CCM 884, CCUG 35392, CIP 81.73, DSM 20033, HAMBI 40, IEGM 400, IFO 15358, JCM 7238, K. varians, LMG 14231, LMG:14231, Micrococcus varians, NBRC 15358, NCDO 777, NCTC 7564
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.