STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KVA01_05660Unannotated protein. (74 aa)    
Predicted Functional Partners:
KVA01_05650
Unannotated protein.
  
    0.662
ung
Unannotated protein; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.
       0.657
KVA01_06380
Unannotated protein.
  
     0.592
KVA01_17660
Unannotated protein.
  
     0.586
KVA01_05680
Unannotated protein.
       0.523
KVA01_13710
Unannotated protein.
  
     0.456
whiA
Unannotated protein; Involved in cell division and chromosome segregation.
  
     0.453
KVA01_18530
Unannotated protein.
  
     0.440
KVA01_20170
Unannotated protein.
  
     0.432
KVA01_02380
Unannotated protein.
  
     0.431
Your Current Organism:
Kocuria varians
NCBI taxonomy Id: 1272
Other names: ATCC 15306, CCM 884, CCUG 35392, CIP 81.73, DSM 20033, HAMBI 40, IEGM 400, IFO 15358, JCM 7238, K. varians, LMG 14231, LMG:14231, Micrococcus varians, NBRC 15358, NCDO 777, NCTC 7564
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.