Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KVA01_03570 | KVA01_05190 | GCA_900014985_02122 | GCA_900014985_01884 | Unannotated protein. | Unannotated protein. | 0.959 |
KVA01_03570 | KVA01_20380 | GCA_900014985_02122 | GCA_900014985_02447 | Unannotated protein. | Unannotated protein. | 0.886 |
KVA01_03570 | sdhA_1 | GCA_900014985_02122 | GCA_900014985_01885 | Unannotated protein. | Unannotated protein. | 0.977 |
KVA01_03570 | sdhA_2 | GCA_900014985_02122 | GCA_900014985_02446 | Unannotated protein. | Unannotated protein. | 0.990 |
KVA01_03570 | sucC | GCA_900014985_02122 | GCA_900014985_01860 | Unannotated protein. | Unannotated protein; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | 0.932 |
KVA01_03570 | sucD | GCA_900014985_02122 | GCA_900014985_01861 | Unannotated protein. | Unannotated protein; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. | 0.932 |
KVA01_05160 | KVA01_05170 | GCA_900014985_01887 | GCA_900014985_01886 | Unannotated protein. | Unannotated protein. | 0.999 |
KVA01_05160 | KVA01_05190 | GCA_900014985_01887 | GCA_900014985_01884 | Unannotated protein. | Unannotated protein. | 0.999 |
KVA01_05160 | fumC | GCA_900014985_01887 | GCA_900014985_01922 | Unannotated protein. | Unannotated protein; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. | 0.967 |
KVA01_05160 | kgd | GCA_900014985_01887 | GCA_900014985_01528 | Unannotated protein. | Unannotated protein. | 0.982 |
KVA01_05160 | sdhA_1 | GCA_900014985_01887 | GCA_900014985_01885 | Unannotated protein. | Unannotated protein. | 0.999 |
KVA01_05160 | sdhA_2 | GCA_900014985_01887 | GCA_900014985_02446 | Unannotated protein. | Unannotated protein. | 0.997 |
KVA01_05160 | sucC | GCA_900014985_01887 | GCA_900014985_01860 | Unannotated protein. | Unannotated protein; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | 0.985 |
KVA01_05160 | sucD | GCA_900014985_01887 | GCA_900014985_01861 | Unannotated protein. | Unannotated protein; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. | 0.981 |
KVA01_05170 | KVA01_05160 | GCA_900014985_01886 | GCA_900014985_01887 | Unannotated protein. | Unannotated protein. | 0.999 |
KVA01_05170 | KVA01_05190 | GCA_900014985_01886 | GCA_900014985_01884 | Unannotated protein. | Unannotated protein. | 0.999 |
KVA01_05170 | fumC | GCA_900014985_01886 | GCA_900014985_01922 | Unannotated protein. | Unannotated protein; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. | 0.935 |
KVA01_05170 | kgd | GCA_900014985_01886 | GCA_900014985_01528 | Unannotated protein. | Unannotated protein. | 0.965 |
KVA01_05170 | sdhA_1 | GCA_900014985_01886 | GCA_900014985_01885 | Unannotated protein. | Unannotated protein. | 0.999 |
KVA01_05170 | sdhA_2 | GCA_900014985_01886 | GCA_900014985_02446 | Unannotated protein. | Unannotated protein. | 0.996 |
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