STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KVA01_17920Unannotated protein. (141 aa)    
Predicted Functional Partners:
KVA01_17910
Unannotated protein; Belongs to the CinA family.
    
 0.729
KVA01_17890
Unannotated protein.
 
   
 0.645
KVA01_17930
Unannotated protein.
 
     0.617
rbpA
Unannotated protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters. Belongs to the RNA polymerase-binding protein RbpA family.
  
    0.601
pgsA
Unannotated protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
       0.597
KVA01_06220
Unannotated protein.
  
  
 0.589
KVA01_13910
Unannotated protein.
  
     0.569
KVA01_11280
Unannotated protein.
  
     0.567
KVA01_19090
Unannotated protein.
  
     0.544
KVA01_06380
Unannotated protein.
  
     0.536
Your Current Organism:
Kocuria varians
NCBI taxonomy Id: 1272
Other names: ATCC 15306, CCM 884, CCUG 35392, CIP 81.73, DSM 20033, HAMBI 40, IEGM 400, IFO 15358, JCM 7238, K. varians, LMG 14231, LMG:14231, Micrococcus varians, NBRC 15358, NCDO 777, NCTC 7564
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.