STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPP14276.1COG0675 Transposase and inactivated derivatives. (109 aa)    
Predicted Functional Partners:
EPP18358.1
COG0675 Transposase and inactivated derivatives.
 
     0.790
EPP14114.1
COG0675 Transposase and inactivated derivatives.
 
     0.784
EPP18569.1
COG0675 Transposase and inactivated derivatives.
 
     0.783
EPP16663.1
COG0675 Transposase and inactivated derivatives.
 
     0.783
EPP14125.1
COG0675 Transposase and inactivated derivatives.
 
     0.783
EPP16189.1
COG0675 Transposase and inactivated derivatives.
 
     0.782
EPP14499.1
COG0675 Transposase and inactivated derivatives.
 
     0.782
EPP14690.1
COG0675 Transposase and inactivated derivatives.
 
     0.781
EPP14604.1
COG0675 Transposase and inactivated derivatives.
 
     0.775
EPP15906.1
COG0675 Transposase and inactivated derivatives.
  
     0.774
Your Current Organism:
Megasphaera sp. NM10
NCBI taxonomy Id: 1273103
Other names: M. sp. NM10
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