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HX89_05570 protein (Dermacoccus nishinomiyaensis) - STRING interaction network
"HX89_05570" - GntR family transcriptional regulator in Dermacoccus nishinomiyaensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HX89_05570GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (298 aa)    
Predicted Functional Partners:
HX89_04320
Oxidoreductase; Derived by automated computational analysis using gene prediction method- Protein Homology (958 aa)
 
   
  0.769
HX89_05555
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (239 aa)
 
     
  0.767
HX89_05560
(4Fe-4S) protein; Derived by automated computational analysis using gene prediction method- Protein Homology (546 aa)
 
     
  0.754
HX89_05565
Fe-S osidoreductase; Derived by automated computational analysis using gene prediction method- Protein Homology (253 aa)
   
   
  0.742
HX89_07585
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (213 aa)
   
   
  0.661
HX89_10475
L-lactate permease; Derived by automated computational analysis using gene prediction method- Protein Homology (554 aa)
 
   
  0.643
HX89_06490
IclR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (260 aa)
 
 
  0.561
Your Current Organism:
Dermacoccus nishinomiyaensis
NCBI taxonomy Id: 1274
Other names: ATCC 29093, CCM 2140, CCUG 33028, CIP 81.71, D. nishinomiyaensis, DSM 20448, Dermacoccus nishinomiyaensis, Dermacoccus nishinomiyensis, Dermatococcus nishinomiyaensis, Dermatococcus nishinomiyensis, IEGM 393, IFO 15356, JCM 11613, LMG 14222, Micrococcus nishinomiyaensis, Micrococcus nishinomyaensis, NBRC 15356, NCTC 11039
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