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HX89_05835 protein (Dermacoccus nishinomiyaensis) - STRING interaction network
"HX89_05835" - ATP-dependent helicase in Dermacoccus nishinomiyaensis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HX89_05835ATP-dependent helicase; Derived by automated computational analysis using gene prediction method- Protein Homology (1320 aa)    
Predicted Functional Partners:
HX89_05840
Diadenosine tetraphosphate hydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology (147 aa)
     
      0.807
HX89_05845
Proteasome protein; Derived by automated computational analysis using gene prediction method- Protein Homology (320 aa)
              0.669
HX89_05830
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (417 aa)
              0.635
topA
DNA topoisomerase 1; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5’-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3’-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA super [...] (940 aa)
   
   
  0.587
HX89_06535
3’-5’ exonuclease; Derived by automated computational analysis using gene prediction method- Protein Homology (459 aa)
   
 
  0.569
orn
Oligoribonuclease; 3’-to-5’ exoribonuclease specific for small oligoribonucleotides (209 aa)
   
        0.552
trmB
tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA (278 aa)
 
      0.514
HX89_11955
DEAD/DEAH box helicase; Derived by automated computational analysis using gene prediction method- Protein Homology (870 aa)
 
 
  0.508
HX89_04470
DNA helicase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the DEAD box helicase family (537 aa)
     
 
  0.480
HX89_03020
RNA helicase; Derived by automated computational analysis using gene prediction method- Protein Homology (540 aa)
     
 
  0.480
Your Current Organism:
Dermacoccus nishinomiyaensis
NCBI taxonomy Id: 1274
Other names: ATCC 29093, CCM 2140, CCUG 33028, CIP 81.71, D. nishinomiyaensis, DSM 20448, Dermacoccus nishinomiyaensis, Dermacoccus nishinomiyensis, Dermatococcus nishinomiyaensis, Dermatococcus nishinomiyensis, IEGM 393, IFO 15356, JCM 11613, LMG 14222, Micrococcus nishinomiyaensis, Micrococcus nishinomyaensis, NBRC 15356, NCTC 11039
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