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HX89_06415 protein (Dermacoccus nishinomiyaensis) - STRING interaction network
"HX89_06415" - CopG family transcriptional regulator in Dermacoccus nishinomiyaensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HX89_06415CopG family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (50 aa)    
Predicted Functional Partners:
HX89_06420
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- GeneMarkS+ (62 aa)
              0.831
HX89_06425
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (80 aa)
              0.671
HX89_12220
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (320 aa)
   
          0.625
HX89_13670
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (180 aa)
   
          0.567
acnA
Aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis-aconitate (934 aa)
              0.516
HX89_12155
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (395 aa)
   
          0.514
HX89_12105
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (690 aa)
   
          0.509
HX89_11880
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (242 aa)
   
          0.447
HX89_03200
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (180 aa)
   
          0.426
HX89_07255
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (314 aa)
   
          0.419
Your Current Organism:
Dermacoccus nishinomiyaensis
NCBI taxonomy Id: 1274
Other names: ATCC 29093, CCM 2140, CCUG 33028, CIP 81.71, D. nishinomiyaensis, DSM 20448, Dermacoccus nishinomiyaensis, Dermacoccus nishinomiyensis, Dermatococcus nishinomiyaensis, Dermatococcus nishinomiyensis, IEGM 393, IFO 15356, JCM 11613, LMG 14222, Micrococcus nishinomiyaensis, Micrococcus nishinomyaensis, NBRC 15356, NCTC 11039
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