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HX89_06470 protein (Dermacoccus nishinomiyaensis) - STRING interaction network
"HX89_06470" - Uncharacterized protein in Dermacoccus nishinomiyaensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HX89_06470Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (340 aa)    
Predicted Functional Partners:
dxs
1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily (678 aa)
              0.816
HX89_10490
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (433 aa)
   
          0.710
HX89_09135
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (244 aa)
   
          0.695
HX89_12440
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (283 aa)
   
          0.694
HX89_09370
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (337 aa)
   
          0.675
HX89_05040
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (334 aa)
   
          0.672
HX89_01105
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (370 aa)
   
          0.665
HX89_05090
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (227 aa)
   
          0.662
HX89_03155
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (233 aa)
   
          0.661
HX89_05415
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (195 aa)
   
          0.659
Your Current Organism:
Dermacoccus nishinomiyaensis
NCBI taxonomy Id: 1274
Other names: ATCC 29093, CCM 2140, CCUG 33028, CIP 81.71, D. nishinomiyaensis, DSM 20448, Dermacoccus nishinomiyaensis, Dermacoccus nishinomiyensis, Dermatococcus nishinomiyaensis, Dermatococcus nishinomiyensis, IEGM 393, IFO 15356, JCM 11613, LMG 14222, Micrococcus nishinomiyaensis, Micrococcus nishinomyaensis, NBRC 15356, NCTC 11039
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