STRINGSTRING
HX89_10315 protein (Dermacoccus nishinomiyaensis) - STRING interaction network
"HX89_10315" - Peptide chain release factor 2 in Dermacoccus nishinomiyaensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HX89_10315Peptide chain release factor 2; Derived by automated computational analysis using gene prediction method- Protein Homology (172 aa)    
Predicted Functional Partners:
HX89_10320
N-acetylneuraminate synthase; Derived by automated computational analysis using gene prediction method- Protein Homology (354 aa)
 
   
  0.955
HX89_10305
Acyl-CoA synthetase; Derived by automated computational analysis using gene prediction method- Protein Homology (428 aa)
 
        0.839
HX89_10365
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (345 aa)
 
   
  0.802
HX89_10325
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (768 aa)
 
          0.796
HX89_10345
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (281 aa)
   
          0.779
HX89_10300
Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family (252 aa)
 
        0.773
HX89_10370
Cytidylyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (510 aa)
 
          0.754
HX89_10360
UDP-4-dehydro-6-deoxy-2-acetamido-D-glucose 4-reductase; Derived by automated computational analysis using gene prediction method- Protein Homology (329 aa)
 
     
  0.725
HX89_10355
Aminotransferase DegT; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the DegT/DnrJ/EryC1 family (376 aa)
 
   
  0.686
HX89_10310
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (84 aa)
              0.579
Your Current Organism:
Dermacoccus nishinomiyaensis
NCBI taxonomy Id: 1274
Other names: ATCC 29093, CCM 2140, CCUG 33028, CIP 81.71, D. nishinomiyaensis, DSM 20448, Dermacoccus nishinomiyaensis, Dermacoccus nishinomiyensis, Dermatococcus nishinomiyaensis, Dermatococcus nishinomiyensis, IEGM 393, IFO 15356, JCM 11613, LMG 14222, Micrococcus nishinomiyaensis, Micrococcus nishinomyaensis, NBRC 15356, NCTC 11039
Server load: low (17%) [HD]