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HX89_11600 protein (Dermacoccus nishinomiyaensis) - STRING interaction network
"HX89_11600" - ABC transporter permease in Dermacoccus nishinomiyaensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HX89_11600ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (847 aa)    
Predicted Functional Partners:
HX89_11605
Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (236 aa)
     
  0.962
HX89_11610
ESAT-6-like protein; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the WXG100 family (98 aa)
 
          0.585
HX89_01960
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (863 aa)
   
          0.480
HX89_08065
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (445 aa)
   
          0.420
Your Current Organism:
Dermacoccus nishinomiyaensis
NCBI taxonomy Id: 1274
Other names: ATCC 29093, CCM 2140, CCUG 33028, CIP 81.71, D. nishinomiyaensis, DSM 20448, Dermacoccus nishinomiyaensis, Dermacoccus nishinomiyensis, Dermatococcus nishinomiyaensis, Dermatococcus nishinomiyensis, IEGM 393, IFO 15356, JCM 11613, LMG 14222, Micrococcus nishinomiyaensis, Micrococcus nishinomyaensis, NBRC 15356, NCTC 11039
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