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HX89_12340 protein (Dermacoccus nishinomiyaensis) - STRING interaction network
"HX89_12340" - Redoxin in Dermacoccus nishinomiyaensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HX89_12340Redoxin; Derived by automated computational analysis using gene prediction method- Protein Homology (200 aa)    
Predicted Functional Partners:
HX89_12335
Cytochrome C biogenesis protein ResC; Derived by automated computational analysis using gene prediction method- Protein Homology (249 aa)
   
  0.968
HX89_00220
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (251 aa)
   
  0.954
HX89_12325
Cytochrome C biogenesis protein CcsB; Derived by automated computational analysis using gene prediction method- Protein Homology (359 aa)
 
   
  0.926
HX89_12330
Cytochrome C biogenesis protein; Derived by automated computational analysis using gene prediction method- Protein Homology (581 aa)
 
   
  0.923
hemL
Glutamate-1-semialdehyde 2,1-aminomutase; Derived by automated computational analysis using gene prediction method- Protein Homology (443 aa)
   
   
  0.904
HX89_12345
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (239 aa)
   
      0.901
HX89_12320
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (82 aa)
              0.845
HX89_06085
Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) (309 aa)
   
 
  0.595
HX89_10515
Flavoprotein disulfide reductase; Catalyzes the reduction of nonspecific electron acceptors such as 2,6-dimethyl-1,4-benzoquinone and 5-hydroxy-1,4-naphthaquinone; does not have lipoamide dehydrogenase activity; Derived by automated computational analysis using gene prediction method- Protein Homology (468 aa)
 
 
  0.562
HX89_04950
Thioredoxin reductase; Derived by automated computational analysis using gene prediction method- Protein Homology (569 aa)
   
 
  0.550
Your Current Organism:
Dermacoccus nishinomiyaensis
NCBI taxonomy Id: 1274
Other names: ATCC 29093, CCM 2140, CCUG 33028, CIP 81.71, D. nishinomiyaensis, DSM 20448, Dermacoccus nishinomiyaensis, Dermacoccus nishinomiyensis, Dermatococcus nishinomiyaensis, Dermatococcus nishinomiyensis, IEGM 393, IFO 15356, JCM 11613, LMG 14222, Micrococcus nishinomiyaensis, Micrococcus nishinomyaensis, NBRC 15356, NCTC 11039
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