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HX89_12725 protein (Dermacoccus nishinomiyaensis) - STRING interaction network
"HX89_12725" - SAM-dependent methyltransferase in Dermacoccus nishinomiyaensis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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[Homology]
Score
HX89_12725SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (517 aa)    
Predicted Functional Partners:
HX89_08285
Methyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family (489 aa)
 
 
  0.992
prfA
Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA (362 aa)
   
 
  0.849
HX89_12730
Anti-sigma factor antagonist; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the anti-sigma-factor antagonist family (116 aa)
              0.731
topA
DNA topoisomerase 1; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5’-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3’-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA super [...] (940 aa)
   
   
  0.603
HX89_09930
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (590 aa)
 
          0.602
HX89_12735
Helicase; Derived by automated computational analysis using gene prediction method- Protein Homology (846 aa)
              0.601
HX89_08275
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5’-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5’-phosphate; In the C-terminal section; belongs to the HTP reductase family (340 aa)
   
        0.597
HX89_08910
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the UPF0246 family (248 aa)
 
          0.505
HX89_00725
Nuclease; Derived by automated computational analysis using gene prediction method- Protein Homology (186 aa)
 
          0.489
HX89_09945
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (107 aa)
 
          0.486
Your Current Organism:
Dermacoccus nishinomiyaensis
NCBI taxonomy Id: 1274
Other names: ATCC 29093, CCM 2140, CCUG 33028, CIP 81.71, D. nishinomiyaensis, DSM 20448, Dermacoccus nishinomiyaensis, Dermacoccus nishinomiyensis, Dermatococcus nishinomiyaensis, Dermatococcus nishinomiyensis, IEGM 393, IFO 15356, JCM 11613, LMG 14222, Micrococcus nishinomiyaensis, Micrococcus nishinomyaensis, NBRC 15356, NCTC 11039
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