STRINGSTRING
HX89_13820 protein (Dermacoccus nishinomiyaensis) - STRING interaction network
"HX89_13820" - DEAD/DEAH box helicase in Dermacoccus nishinomiyaensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HX89_13820DEAD/DEAH box helicase; Derived by automated computational analysis using gene prediction method- Protein Homology (919 aa)    
Predicted Functional Partners:
HX89_13825
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (409 aa)
 
 
 
  0.977
HX89_13845
DNA methyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (500 aa)
 
 
  0.907
HX89_13835
Restriction endonuclease; Derived by automated computational analysis using gene prediction method- Protein Homology (349 aa)
 
          0.714
HX89_06305
Restriction endonuclease subunit M; Derived by automated computational analysis using gene prediction method- Protein Homology (650 aa)
 
 
  0.659
HX89_13815
Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (548 aa)
              0.578
HX89_13830
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (234 aa)
              0.512
HX89_14485
Damage-inducible protein; Derived by automated computational analysis using gene prediction method- Protein Homology (1607 aa)
 
 
  0.471
HX89_01010
Helicase; Derived by automated computational analysis using gene prediction method- Protein Homology (1022 aa)
 
       
0.464
HX89_06315
Restriction endonuclease subunit R; Derived by automated computational analysis using gene prediction method- Protein Homology (1002 aa)
 
          0.435
Your Current Organism:
Dermacoccus nishinomiyaensis
NCBI taxonomy Id: 1274
Other names: ATCC 29093, CCM 2140, CCUG 33028, CIP 81.71, D. nishinomiyaensis, DSM 20448, Dermacoccus nishinomiyaensis, Dermacoccus nishinomiyensis, Dermatococcus nishinomiyaensis, Dermatococcus nishinomiyensis, IEGM 393, IFO 15356, JCM 11613, LMG 14222, Micrococcus nishinomiyaensis, Micrococcus nishinomyaensis, NBRC 15356, NCTC 11039
Server load: low (6%) [HD]