STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000455265_03120Unannotated protein. (422 aa)    
Predicted Functional Partners:
GCA_000455265_02532
Unannotated protein.
     0.784
GCA_000455265_03119
Unannotated protein.
 
     0.773
GCA_000455265_00331
Unannotated protein.
 
    0.747
GCA_000455265_03150
Unannotated protein.
 
    0.745
GCA_000455265_03121
Unannotated protein.
       0.671
GCA_000455265_03122
Unannotated protein.
       0.671
GCA_000455265_00979
Unannotated protein.
 
     0.640
GCA_000455265_03155
Unannotated protein.
  
     0.632
GCA_000455265_03156
Unannotated protein.
  
     0.624
GCA_000455265_04602
Unannotated protein.
 
     0.622
Your Current Organism:
Paenibacillus antibioticophila
NCBI taxonomy Id: 1274374
Other names: CSUR P1358, DSM 28228, P. antibioticophila, Paenibacillus sp. GD11, strain GD11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.