STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EME73772.1ABC transporter permease; COG0577 ABC-type antimicrobial peptide transport system, permease component. (647 aa)    
Predicted Functional Partners:
EME73773.1
Bacitracin ABC transporter ATP-binding protein BceA; COG1136 ABC-type antimicrobial peptide transport system, ATPase component.
 
 0.996
BceS
Two-component sensor histidine kinase BceS; COG0642 Signal transduction histidine kinase.
 
  
 0.927
EME73775.1
Sensory transduction protein BceR; COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
  
 0.917
LolD
ABC transporter ATP-binding protein; COG1136 ABC-type antimicrobial peptide transport system, ATPase component.
 
 
 0.825
EME73281.1
Bacitracin export ATP-binding protein BceA; COG1136 ABC-type antimicrobial peptide transport system, ATPase component.
 
 
 0.820
EME74080.1
Sporulation protein YdcC; COG2834 Outer membrane lipoprotein-sorting protein.
 
 
 
 0.816
EME73829.1
ABC transporter ATP-binding protein YxdL; COG1136 ABC-type antimicrobial peptide transport system, ATPase component.
 
 
 0.808
EME73983.1
ABC transporter ATP-binding protein YclH; COG1136 ABC-type antimicrobial peptide transport system, ATPase component.
  
 
 0.618
EME76680.1
Acetoin ABC transporter ATP-binding protein YtrE; COG1136 ABC-type antimicrobial peptide transport system, ATPase component.
  
 
 0.614
MacB
ABC transporter ATP-binding protein; COG1136 ABC-type antimicrobial peptide transport system, ATPase component.
  
 
 0.614
Your Current Organism:
Bacillus sonorensis
NCBI taxonomy Id: 1274524
Other names: B. sonorensis L12, Bacillus sonorensis L12
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