STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANW04478.1Proline hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (266 aa)    
Predicted Functional Partners:
ANW05861.1
Ectoine hydrolase DoeA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.926
ANW03042.1
Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.924
ANW03077.1
Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.924
ANW02985.1
Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.923
ANW03067.1
Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.923
ANW03875.1
Non-ribosomal peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.701
ANW03092.1
Diaminobutyrate--2-oxoglutarate transaminase; Catalyzes reversively the conversion of L-aspartate beta- semialdehyde (ASA) to L-2,4-diaminobutyrate (DABA) by transamination with L-glutamate; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
   
 0.629
ANW04479.1
Flagellar biosynthesis protein FlgA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.617
ANW00713.1
Tripartite tricarboxylate transporter TctB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.542
ANW04477.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.525
Your Current Organism:
Bradyrhizobium icense
NCBI taxonomy Id: 1274631
Other names: B. icense, Bradyrhizobium icense Duran et al. 2014, Bradyrhizobium sp. LMTR 13, Bradyrhizobium sp. LMTR 19, Bradyrhizobium sp. LMTR 50, CECT 8509, CNPSo 2583, HAMBI 3584, strain LMTR 13
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