STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101350353Nuclear pore membrane glycoprotein 210. (1905 aa)    
Predicted Functional Partners:
LOC101354044
ranBP2-like and GRIP domain-containing protein 4 isoform X1.
   
 0.964
LOC101343144
Nuclear pore membrane glycoprotein 210-like.
  
  
 
0.903
LOC101347999
Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family.
    
 0.881
LOC101344499
Nuclear pore complex protein Nup155 isoform X1.
   
 0.879
LOC101348698
Nuclear pore complex protein Nup98-Nup96 isoform X1.
   
 0.874
LOC101348897
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.867
LOC101344349
Nucleoporin SEH1 isoform X2; Belongs to the WD repeat SEC13 family.
   
 0.866
LOC101354487
Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family.
   
 0.862
LOC101361284
Nuclear pore complex protein Nup205.
   
 0.861
LOC101353303
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
   
 0.859
Your Current Organism:
Trichechus manatus
NCBI taxonomy Id: 127582
Other names: Florida manatee, T. manatus latirostris, Trichechus manatus latirostris
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.