STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101360104ALS2 C-terminal-like protein. (856 aa)    
Predicted Functional Partners:
LOC101343431
Protein unc-79 homolog isoform X1.
    
 0.690
LOC101359142
Ataxin-2-like protein isoform X2.
    
 
 0.662
LOC101358570
Rho GTPase-activating protein 17.
      
 0.596
LOC101354367
MICAL-like protein 2.
    
 
 0.576
LOC101346739
Exocyst complex component 3-like protein 4.
      
 0.574
LOC101343177
Ras and Rab interactor 3.
     
 0.570
LOC101345297
Rab5 GDP/GTP exchange factor isoform X1.
   
 0.530
LOC101340449
GTPase-activating protein and VPS9 domain-containing protein 1 isoform X1.
    
 0.515
LOC101344293
Misshapen-like kinase 1 isoform X1.
      
 0.506
LOC101354044
ranBP2-like and GRIP domain-containing protein 4 isoform X1.
    
 0.493
Your Current Organism:
Trichechus manatus
NCBI taxonomy Id: 127582
Other names: Florida manatee, T. manatus latirostris, Trichechus manatus latirostris
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.